Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-n-acetylhexosaminidase | DWX04_06035 | Not Available | Positive | 1444346 - 1446652 | 85868.1 |
| hypothetical protein | DWX04_06040 | Not Available | Negative | 1446762 - 1447253 | 17873.6 |
| hypothetical protein | DWX04_06045 | Not Available | Negative | 1447272 - 1447493 | 8766.94 |
| carbon starvation protein a | DWX04_06050 | Not Available | Negative | 1447480 - 1448910 | 52225.5 |
| s-layer protein | DWX04_06055 | Not Available | Positive | 1448989 - 1450668 | 64140.6 |
| hypothetical protein | DWX04_06060 | Not Available | Positive | 1450834 - 1451049 | 7955.02 |
| cell filamentation protein fic | DWX04_06065 | Not Available | Negative | 1451017 - 1452015 | 39600.1 |
| hypothetical protein | DWX04_06070 | Not Available | Negative | 1452018 - 1452611 | 22592.0 |
| hypothetical protein | DWX04_06075 | Not Available | Negative | 1453023 - 1453241 | 7989.67 |
| phosphoribosylformylglycinamidine cyclo-ligase | DWX04_06080 | Not Available | Positive | 1453848 - 1455017 | 42663.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

