Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | DWX04_05985 | Not Available | Negative | 1427130 - 1427987 | 31996.1 |
| duf4924 family protein | DWX04_05990 | Not Available | Negative | 1428002 - 1428544 | 21340.1 |
| lyse family translocator | DWX04_05995 | Not Available | Negative | 1428616 - 1429275 | 24319.7 |
| phosphoribosylformylglycinamidine synthase | DWX04_06000 | Not Available | Positive | 1429426 - 1433130 | 137244.0 |
| hybrid sensor histidine kinase/response regulator | DWX04_06005 | Not Available | Positive | 1433208 - 1437224 | 154460.0 |
| chromate transporter | DWX04_06010 | Not Available | Positive | 1437229 - 1437777 | 20451.8 |
| chromate transporter | DWX04_06015 | Not Available | Positive | 1437774 - 1438346 | 21054.4 |
| hypothetical protein | DWX04_06020 | Not Available | Negative | 1438630 - 1440129 | 58057.4 |
| excinuclease abc subunit uvra | DWX04_06025 | Not Available | Positive | 1440211 - 1443012 | 104844.0 |
| endonuclease/exonuclease/phosphatase family protein | DWX04_06030 | Not Available | Positive | 1443258 - 1444289 | 39589.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

