Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_05930 | Not Available | Positive | 1413071 - 1415269 | 86181.9 |
| tolc family protein | DWX04_05935 | Not Available | Positive | 1415332 - 1416765 | 53862.0 |
| biotin/lipoyl-binding protein | DWX04_05940 | Not Available | Positive | 1416783 - 1417778 | 36927.8 |
| abc transporter permease | DWX04_05945 | Not Available | Positive | 1417839 - 1419011 | 43632.7 |
| abc transporter permease | DWX04_05950 | Not Available | Positive | 1418995 - 1420185 | 44503.8 |
| hypothetical protein | DWX04_05960 | Not Available | Negative | 1421560 - 1422639 | 40336.0 |
| duf108 domain-containing protein | DWX04_05965 | Not Available | Positive | 1422936 - 1423724 | 28162.8 |
| dihydrofolate reductase | DWX04_05970 | Not Available | Negative | 1423707 - 1424591 | 32604.2 |
| molecular chaperone djla | DWX04_05975 | Not Available | Positive | 1424698 - 1425480 | 29022.0 |
| peptide chain release factor 3 | DWX04_05980 | Not Available | Negative | 1425555 - 1427123 | 59982.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

