Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DWX04_05830 | Not Available | Negative | 1387579 - 1388868 | 48530.8 |
| acrb/acrd/acrf family protein | DWX04_05835 | Not Available | Negative | 1388855 - 1391914 | 113018.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWX04_05840 | Not Available | Negative | 1391935 - 1392960 | 37809.0 |
| glsb/yeaq/ymge family stress response membrane protein | DWX04_05845 | Not Available | Positive | 1393200 - 1393451 | 8688.23 |
| tolc family protein | DWX04_05850 | Not Available | Negative | 1393540 - 1394997 | 54863.0 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DWX04_05855 | Not Available | Negative | 1394975 - 1398124 | 115634.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWX04_05860 | Not Available | Negative | 1398137 - 1399288 | 43842.2 |
| hypothetical protein | DWX04_05865 | Not Available | Negative | 1399411 - 1399833 | 16008.7 |
| aminopeptidase p family protein | DWX04_05870 | Not Available | Positive | 1399950 - 1401110 | 42418.8 |
| glutamine-hydrolyzing gmp synthase | DWX04_05875 | Not Available | Negative | 1401267 - 1402574 | 48267.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

