Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomethylpyrimidine synthase thic | DWX04_00245 | Not Available | Positive | 48204 - 49904 | 63476.0 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 49914 - 50283 | Not Available |
| hypothetical protein | DWX04_00250 | Not Available | Positive | 49926 - 50441 | 19540.8 |
| flavodoxin family protein | DWX04_00255 | Not Available | Positive | 50441 - 51013 | 21329.5 |
| 2-iminoacetate synthase thih | DWX04_00260 | Not Available | Positive | 51099 - 52229 | 43251.8 |
| hesa/moeb/thif family protein | DWX04_00265 | Not Available | Positive | 52308 - 53000 | 25388.8 |
| glutathionylspermidine synthase family protein | DWX04_00270 | Not Available | Negative | 53113 - 54237 | 43020.5 |
| hypothetical protein | DWX04_00275 | Not Available | Negative | 54250 - 54603 | 12947.3 |
| thiamine phosphate synthase | DWX04_00280 | Not Available | Positive | 54823 - 55431 | 22934.7 |
| ribose-phosphate pyrophosphokinase | DWX04_00285 | Not Available | Positive | 55596 - 56534 | 34190.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

