Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4836 family protein | DWX04_05780 | Not Available | Positive | 1376335 - 1377867 | 56158.9 |
| atp-binding cassette domain-containing protein | DWX04_05785 | Not Available | Positive | 1377864 - 1378508 | 24439.4 |
| abc transporter permease | DWX04_05790 | Not Available | Positive | 1378505 - 1379707 | 44901.3 |
| yjbq family protein | DWX04_05795 | Not Available | Positive | 1379716 - 1380129 | 15533.7 |
| hypothetical protein | DWX04_05800 | Not Available | Negative | 1380159 - 1380344 | 7314.11 |
| hypothetical protein | DWX04_05805 | Not Available | Positive | 1380531 - 1381136 | 23436.9 |
| aldehyde dehydrogenase family protein | DWX04_05810 | Not Available | Positive | 1381507 - 1384827 | 123986.0 |
| hypothetical protein | DWX04_05815 | Not Available | Positive | 1385343 - 1385615 | 10520.9 |
| dna-binding response regulator | DWX04_05820 | Not Available | Negative | 1385644 - 1386417 | 29809.8 |
| histidine kinase | DWX04_05825 | Not Available | Negative | 1386410 - 1387438 | 39021.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

