Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4858 domain-containing protein | DWX04_05625 | Not Available | Negative | 1343817 - 1344587 | 29525.6 |
| bifunctional dihydroorotate dehydrogenase b nad binding subunit/nadph-dependent glutamate synthase | DWX04_05630 | Not Available | Negative | 1344998 - 1347295 | 82906.6 |
| hypothetical protein | DWX04_05635 | Not Available | Positive | 1347329 - 1347523 | 7376.55 |
| mfs transporter | DWX04_05640 | Not Available | Negative | 1347479 - 1348696 | 43390.6 |
| serine--trna ligase | DWX04_05645 | Not Available | Negative | 1348837 - 1350111 | 47884.3 |
| nicotinamide riboside transporter pnuc | DWX04_05650 | Not Available | Positive | 1350231 - 1350803 | 22144.5 |
| thiamine diphosphokinase | DWX04_05655 | Not Available | Positive | 1350790 - 1351425 | 23745.4 |
| 50s ribosomal protein l27 | DWX04_05660 | Not Available | Negative | 1351482 - 1351745 | 9251.19 |
| 50s ribosomal protein l21 | DWX04_05665 | Not Available | Negative | 1351767 - 1352084 | 11743.4 |
| had family hydrolase | DWX04_05670 | Not Available | Negative | 1352298 - 1354367 | 79614.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

