Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | DWX04_05575 | Not Available | Negative | 1335617 - 1336102 | 18138.7 |
| phosphorylase | DWX04_05580 | Not Available | Negative | 1336312 - 1337190 | 32767.5 |
| upf0365 family protein | DWX04_05585 | Not Available | Negative | 1337384 - 1338385 | 36124.0 |
| nodulation efficiency protein d (nfed) | DWX04_05590 | Not Available | Negative | 1338528 - 1338998 | 17112.5 |
| hypothetical protein | DWX04_05595 | Not Available | Negative | 1339012 - 1340421 | 54207.8 |
| adenine nucleotide alpha hydrolase family protein | DWX04_05600 | Not Available | Positive | 1340565 - 1341320 | 29155.8 |
| hypothetical protein | DWX04_05605 | Not Available | Negative | 1342014 - 1342235 | 8477.08 |
| hypothetical protein | DWX04_05610 | Not Available | Positive | 1342833 - 1343114 | 10751.2 |
| hypothetical protein | DWX04_05615 | Not Available | Negative | 1343263 - 1343541 | 10877.5 |
| hypothetical protein | DWX04_05620 | Not Available | Positive | 1343496 - 1343870 | 14330.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

