Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_05525 | Not Available | Negative | 1325320 - 1325793 | 17973.7 |
| dna primase | DWX04_05530 | Not Available | Negative | 1326071 - 1327009 | 36455.1 |
| mobilization protein | DWX04_05535 | Not Available | Negative | 1327085 - 1328200 | 42337.9 |
| dna-binding protein | DWX04_05540 | Not Available | Negative | 1328331 - 1328666 | 13133.3 |
| hypothetical protein | DWX04_05545 | Not Available | Negative | 1328836 - 1329561 | 28762.6 |
| dna-binding protein | DWX04_05550 | Not Available | Negative | 1329776 - 1330156 | 14813.9 |
| hypothetical protein | DWX04_05555 | Not Available | Negative | 1330168 - 1330860 | 26822.9 |
| site-specific integrase | DWX04_05560 | Not Available | Negative | 1331001 - 1332206 | 47110.8 |
| dna-binding protein | DWX04_05565 | Not Available | Negative | 1332287 - 1333795 | 59494.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DWX04_05570 | Not Available | Negative | 1334110 - 1335606 | 55245.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

