Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_05470 | Not Available | Negative | 1316855 - 1318093 | 46757.7 |
| hypothetical protein | DWX04_05475 | Not Available | Negative | 1318090 - 1318488 | 15633.1 |
| hypothetical protein | DWX04_05480 | Not Available | Negative | 1318777 - 1319604 | 30313.0 |
| integrase | DWX04_05485 | Not Available | Negative | 1319672 - 1320922 | 48066.6 |
| hypothetical protein | DWX04_05490 | Not Available | Negative | 1320960 - 1321274 | 12031.1 |
| dna-binding protein | DWX04_05495 | Not Available | Negative | 1321287 - 1321607 | 12323.9 |
| site-specific integrase | DWX04_05500 | Not Available | Negative | 1321756 - 1323018 | 48645.9 |
| site-specific integrase | DWX04_05505 | Not Available | Negative | 1323141 - 1324313 | 44936.0 |
| duf4134 domain-containing protein | DWX04_05515 | Not Available | Negative | 1324508 - 1324915 | 14965.7 |
| duf4134 domain-containing protein | DWX04_05520 | Not Available | Negative | 1324986 - 1325339 | 12842.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

