Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DWX04_05415 | Not Available | Negative | 1307067 - 1308617 | 58966.4 |
| hypothetical protein | DWX04_05420 | Not Available | Negative | 1308982 - 1309725 | 26275.6 |
| dna-binding protein | DWX04_05425 | Not Available | Negative | 1309737 - 1310141 | 14891.0 |
| site-specific integrase | DWX04_05430 | Not Available | Negative | 1310156 - 1311268 | 42660.6 |
| dna-binding protein | DWX04_05435 | Not Available | Negative | 1311283 - 1312119 | 32242.6 |
| atpase | DWX04_05440 | Not Available | Negative | 1312287 - 1313714 | 54535.3 |
| duf4133 domain-containing protein | DWX04_05445 | Not Available | Negative | 1313869 - 1314171 | 11102.9 |
| aminoglycoside nucleotidyltransferase | DWX04_05455 | Not Available | Positive | 1314690 - 1315190 | 19136.4 |
| phosphorylase | DWX04_05460 | Not Available | Positive | 1315202 - 1315951 | 27847.2 |
| hypothetical protein | DWX04_05465 | Not Available | Negative | 1316220 - 1316837 | 24458.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

