Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5045 domain-containing protein | DWX04_05360 | Not Available | Negative | 1293830 - 1294561 | 27551.5 |
| hypothetical protein | DWX04_05365 | Not Available | Negative | 1294586 - 1295329 | 28584.2 |
| hypothetical protein | DWX04_05370 | Not Available | Negative | 1295304 - 1297862 | 96046.1 |
| trag family conjugative transposon atpase | DWX04_05375 | Not Available | Negative | 1297872 - 1299065 | 46359.1 |
| abc transporter atp-binding protein | DWX04_05380 | Not Available | Positive | 1299535 - 1301133 | 59982.6 |
| duf5036 domain-containing protein | DWX04_05385 | Not Available | Positive | 1301547 - 1302275 | 27233.8 |
| tonb-dependent receptor | DWX04_05395 | Not Available | Positive | 1302965 - 1305283 | 87663.7 |
| hypothetical protein | DWX04_05400 | Not Available | Positive | 1305292 - 1305510 | 8435.24 |
| hypothetical protein | DWX04_05405 | Not Available | Positive | 1305662 - 1305934 | 10456.5 |
| dna-binding protein | DWX04_05410 | Not Available | Positive | 1306066 - 1306410 | 13921.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

