Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_05305 | Not Available | Positive | 1283354 - 1284673 | 51497.8 |
| hypothetical protein | DWX04_05310 | Not Available | Positive | 1284663 - 1285703 | 39858.8 |
| type iv secretory system conjugative dna transfer family protein | DWX04_05320 | Not Available | Negative | 1286185 - 1288371 | 83713.0 |
| duf1566 domain-containing protein | DWX04_05325 | Not Available | Negative | 1288388 - 1289035 | 24226.4 |
| hypothetical protein | DWX04_05330 | Not Available | Negative | 1289041 - 1289556 | 19365.2 |
| conjugative transposon protein tran | DWX04_05335 | Not Available | Negative | 1289560 - 1290417 | 32664.3 |
| conjugative transposon protein tram | DWX04_05340 | Not Available | Negative | 1290436 - 1291629 | 44525.3 |
| hypothetical protein | DWX04_05345 | Not Available | Negative | 1291607 - 1292026 | 16333.6 |
| conjugative transposon protein trak | DWX04_05350 | Not Available | Negative | 1292028 - 1292642 | 23722.2 |
| hypothetical protein | DWX04_05355 | Not Available | Negative | 1292666 - 1293796 | 42251.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

