Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 41320 - 41392 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 41406 - 41492 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 41513 - 41596 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 41644 - 41716 | Not Available |
| carboxynorspermidine decarboxylase | DWX04_00215 | Not Available | Negative | 41890 - 43053 | 44398.1 |
| atp-dependent dna helicase | DWX04_00220 | Not Available | Negative | 43086 - 45476 | 91482.8 |
| superoxide dismutase | DWX04_00225 | Not Available | Positive | 45585 - 46202 | 23314.6 |
| sulfur carrier protein this | DWX04_00230 | Not Available | Positive | 46588 - 46788 | 7153.82 |
| thiamine phosphate synthase | DWX04_00235 | Not Available | Positive | 46778 - 47404 | 23079.1 |
| thiazole synthase | DWX04_00240 | Not Available | Positive | 47422 - 48195 | 27533.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

