Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4433 domain-containing protein | DWX04_05250 | Not Available | Negative | 1258685 - 1264078 | 212539.0 |
| s1 rna-binding domain-containing protein | DWX04_05255 | Not Available | Negative | 1264068 - 1268576 | 173105.0 |
| hypothetical protein | DWX04_05260 | Not Available | Negative | 1268585 - 1269325 | 27565.7 |
| old family endonuclease | DWX04_05265 | Not Available | Negative | 1269363 - 1271228 | 70616.3 |
| type ii restriction endonuclease subunit m | DWX04_05270 | Not Available | Negative | 1271239 - 1276134 | 190025.0 |
| atp-dependent helicase | DWX04_05275 | Not Available | Negative | 1276140 - 1278935 | 107389.0 |
| xre family transcriptional regulator | DWX04_05280 | Not Available | Negative | 1278946 - 1279155 | 7944.67 |
| peptidyl-arginine deiminase | DWX04_05285 | Not Available | Positive | 1279583 - 1281118 | 59403.6 |
| hypothetical protein | DWX04_05290 | Not Available | Positive | 1281217 - 1281723 | 18480.6 |
| hypothetical protein | DWX04_05300 | Not Available | Positive | 1282143 - 1283357 | 46936.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

