Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_05200 | Not Available | Negative | 1243083 - 1244555 | 56528.5 |
| hypothetical protein | DWX04_05205 | Not Available | Negative | 1244581 - 1246218 | 61348.7 |
| hypothetical protein | DWX04_05210 | Not Available | Negative | 1246243 - 1246452 | 8289.32 |
| duf4099 domain-containing protein | DWX04_05215 | Not Available | Negative | 1246486 - 1247238 | 29100.3 |
| m23 family peptidase | DWX04_05220 | Not Available | Positive | 1247515 - 1248117 | 22289.1 |
| hypothetical protein | DWX04_05225 | Not Available | Negative | 1248166 - 1249185 | 39349.3 |
| hypothetical protein | DWX04_05230 | Not Available | Negative | 1249193 - 1249723 | 19866.6 |
| dna helicase uvrd | DWX04_05235 | Not Available | Negative | 1249740 - 1251851 | 80407.3 |
| duf1998 domain-containing protein | DWX04_05240 | Not Available | Negative | 1251856 - 1257993 | 234612.0 |
| appr-1-p processing protein | DWX04_05245 | Not Available | Negative | 1257997 - 1258692 | 26861.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

