Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_05150 | Not Available | Negative | 1233100 - 1233714 | 22672.0 |
| glucosaminidase | DWX04_05155 | Not Available | Negative | 1233752 - 1235332 | 58155.1 |
| duf1738 domain-containing protein | DWX04_05160 | Not Available | Negative | 1235345 - 1237780 | 92754.3 |
| hypothetical protein | DWX04_05165 | Not Available | Negative | 1237808 - 1239196 | 51636.8 |
| hypothetical protein | DWX04_05170 | Not Available | Negative | 1239235 - 1239516 | 11121.1 |
| m23 family peptidase | DWX04_05175 | Not Available | Negative | 1239540 - 1240370 | 31558.9 |
| hypothetical protein | DWX04_05180 | Not Available | Negative | 1240397 - 1241074 | 22983.7 |
| hypothetical protein | DWX04_05185 | Not Available | Negative | 1241129 - 1241830 | 27188.2 |
| hypothetical protein | DWX04_05190 | Not Available | Negative | 1241835 - 1242605 | 28739.7 |
| ph domain-containing protein | DWX04_05195 | Not Available | Negative | 1242586 - 1243077 | 19026.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

