Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_05100 | Not Available | Positive | 1220021 - 1221154 | 43202.9 |
| hypothetical protein | DWX04_05105 | Not Available | Positive | 1221168 - 1221623 | 17609.3 |
| hypothetical protein | DWX04_05110 | Not Available | Positive | 1221624 - 1221986 | 14272.5 |
| hypothetical protein | DWX04_05115 | Not Available | Positive | 1221976 - 1222404 | 16618.9 |
| hypothetical protein | DWX04_05120 | Not Available | Positive | 1222416 - 1222913 | 19655.8 |
| hypothetical protein | DWX04_05125 | Not Available | Positive | 1222990 - 1223910 | 34781.3 |
| recombinase | DWX04_05130 | Not Available | Positive | 1224174 - 1225628 | 55464.9 |
| ompa family protein | DWX04_05135 | Not Available | Positive | 1225679 - 1227127 | 52806.6 |
| atp-binding protein | DWX04_05140 | Not Available | Negative | 1227415 - 1231401 | 155477.0 |
| duf1738 domain-containing protein | DWX04_05145 | Not Available | Negative | 1231589 - 1233100 | 57561.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

