Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_05035 | Not Available | Positive | 1209848 - 1210813 | 36373.1 |
| rna-splicing ligase rtcb | DWX04_05040 | Not Available | Positive | 1210824 - 1212092 | 48306.0 |
| ribonucleotide-diphosphate reductase subunit alpha | DWX04_05060 | Not Available | Positive | 1213576 - 1214157 | 21982.4 |
| duf1273 family protein | DWX04_05065 | Not Available | Positive | 1214154 - 1214651 | 18911.8 |
| hypothetical protein | DWX04_05070 | Not Available | Negative | 1214919 - 1215386 | 17546.2 |
| dna methylase | DWX04_05075 | Not Available | Negative | 1215328 - 1216821 | 56438.7 |
| duf2958 domain-containing protein | DWX04_05080 | Not Available | Positive | 1217196 - 1217582 | 14638.3 |
| hypothetical protein | DWX04_05085 | Not Available | Positive | 1217608 - 1218150 | 20646.9 |
| duf1653 domain-containing protein | DWX04_05090 | Not Available | Negative | 1218248 - 1219048 | 31174.5 |
| recombinase family protein | DWX04_05095 | Not Available | Negative | 1219054 - 1219710 | 25070.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

