Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF18-14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF18-14 AF18-14.Scaf84, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX04_04810 | Not Available | Negative | 1165309 - 1165521 | 8340.7 |
| hypothetical protein | DWX04_04815 | Not Available | Negative | 1165554 - 1165952 | 15547.8 |
| tatd family deoxyribonuclease | DWX04_04820 | Not Available | Negative | 1165975 - 1166661 | 26148.6 |
| hypothetical protein | DWX04_04825 | Not Available | Negative | 1166658 - 1167995 | 50610.1 |
| hypothetical protein | DWX04_04830 | Not Available | Negative | 1167985 - 1168812 | 30121.4 |
| xre family transcriptional regulator | DWX04_04840 | Not Available | Positive | 1170782 - 1170985 | 7718.51 |
| type i restriction endonuclease subunit r | DWX04_04845 | Not Available | Positive | 1170987 - 1174217 | 125251.0 |
| sam-dependent dna methyltransferase | DWX04_04850 | Not Available | Positive | 1174223 - 1175884 | 62048.6 |
| cell filamentation protein fic | DWX04_04855 | Not Available | Positive | 1175877 - 1176884 | 38925.1 |
| hypothetical protein | DWX04_04865 | Not Available | Negative | 1178247 - 1178645 | 15877.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

