Phocaeicola vulgatus strain AF18-14

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus strain AF18-14 is a Gram-positive, rod-shaped bacterium that exists as single cells and is categorized as an anaerobe, indicating that it thrives in environments devoid of oxygen. This strain is host-associated, suggesting a relationship with specific hosts, potentially contributing to the microbial communities found within them. As a member of the genus Phocaeicola, this strain may participate in various metabolic processes that are essential to the host's gut microbiome. While the specifics of its metabolic capabilities remain uncharacterized, its anaerobic nature implies that it may play a role in fermentation processes associated with the digestion of complex carbohydrates. Given the ecological role of closely related species in maintaining gut health and stability, P. vulgatus strain AF18-14 may similarly contribute to the overall functionality of the gut ecosystem by influencing nutrient availability and microbial diversity. Understanding the traits and behaviors of P. vulgatus strain AF18-14 can provide insights into the dynamics of host-associated microbial communities and the potential synergies between such bacteria and their hosts. Further exploration of this strain's interactions within its habitat could enhance our knowledge of its role in health and disease states associated with host organisms.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus strain AF18-14
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus strain AF18-14

Accession NumberQRXI00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Major capsid proteinDWX04_09425Not Available-2230602 - 223229061946.4
1_nc_021802: phage prohead protease proteinDWX04_09430Not Available-2232316 - 223336539416.8
Portal proteinDWX04_09435Not Available-2233319 - 223474654779.9
Terminase large subunitDWX04_09440Not Available-2234875 - 223689377524.2
Terminase small subunitDWX04_09445Not Available-2236957 - 223750220689.6
Putative nad dependent epimeraseDWX04_09450Not Available-2237598 - 223840130231.1
PrimaseDWX04_09455Not Available-2238453 - 223923229990.7
AttlNot AvailableNot Available+2239257 - 2239268Not Available
Aaa-atpaseDWX04_09460Not Available-2239274 - 223984622071.3
hypothetical proteinDWX04_09465Not Available-2239960 - 224071229313.5

Displaying genes 1 – 10 of 4305 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites