Dorea formicigenerans strain AF19-4AC

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea formicigenerans strain AF19-4AC is a Gram-positive, anaerobic bacterium primarily found in the gut of Homo sapiens. This strain possesses flagella, which may contribute to its motility within the intestinal environment. Notably, it has a single replicon, indicating a streamlined genomic structure that could play a role in its adaptability and survival in the complex gut microbiome. The anaerobic nature of Dorea formicigenerans suggests that it thrives in low-oxygen conditions typical of the human gastrointestinal tract. This trait is crucial, as the gut is a habitat with a diverse array of microbial communities that compete for resources and space. The presence of flagella in this strain could facilitate its movement and colonization within the gut, allowing it to establish itself effectively amidst other microorganisms. The accession number QRWH00000000.1 provides a reference for further studies and genomic analysis of this strain. Understanding Dorea formicigenerans and its interactions in the gut ecosystem can offer insights into its role in human health. Research into its metabolic functions and contributions to gut health could reveal its importance in digestion, nutrient absorption, and maintaining a balanced microbiome. This highlights the potential ecological significance of Dorea formicigenerans within the complex interactions that define gut microbiota.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea formicigenerans
Strainstrain AF19-4AC

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dorea formicigenerans strain AF19-4AC AF19-4AC.Scaf48, whole

Gene Summary

Adenine Count

1028895 bp

Thymine Count

1033731 bp

Guanine Count

692558 bp

Cytosine Count

701249 bp

Genome Length

3456853 bp

Protein-coding Genes

3115 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal phosphate-dependent aminotransferaseDWX53_00665Not AvailablePositive147678 - 14886543858.3
histidinol-phosphate transaminaseDWX53_00670Not AvailablePositive148918 - 14997640786.5
small multi-drug export proteinDWX53_00675Not AvailablePositive150028 - 15054018218.6
3-deoxy-7-phosphoheptulonate synthaseDWX53_00680Not AvailablePositive150589 - 15162038805.5
xre family transcriptional regulatorDWX53_00685Not AvailableNegative151652 - 15200513397.0
hypothetical proteinDWX53_00690Not AvailablePositive152206 - 15266717325.5
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseDWX53_00695Not AvailablePositive152751 - 15380637584.1
polc-type dna polymerase iiiDWX53_00700Not AvailablePositive153799 - 158364171409.0
anaerobic ribonucleoside-triphosphate reductaseDWX53_00705Not AvailablePositive158604 - 16079383257.9
anaerobic ribonucleoside-triphosphate reductase activating proteinDWX53_00710Not AvailablePositive160892 - 16138618934.6

Displaying genes 211 – 220 of 3214 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.