Dorea formicigenerans strain AF19-4AC

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea formicigenerans strain AF19-4AC is a Gram-positive, anaerobic bacterium primarily found in the gut of Homo sapiens. This strain possesses flagella, which may contribute to its motility within the intestinal environment. Notably, it has a single replicon, indicating a streamlined genomic structure that could play a role in its adaptability and survival in the complex gut microbiome. The anaerobic nature of Dorea formicigenerans suggests that it thrives in low-oxygen conditions typical of the human gastrointestinal tract. This trait is crucial, as the gut is a habitat with a diverse array of microbial communities that compete for resources and space. The presence of flagella in this strain could facilitate its movement and colonization within the gut, allowing it to establish itself effectively amidst other microorganisms. The accession number QRWH00000000.1 provides a reference for further studies and genomic analysis of this strain. Understanding Dorea formicigenerans and its interactions in the gut ecosystem can offer insights into its role in human health. Research into its metabolic functions and contributions to gut health could reveal its importance in digestion, nutrient absorption, and maintaining a balanced microbiome. This highlights the potential ecological significance of Dorea formicigenerans within the complex interactions that define gut microbiota.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea formicigenerans
Strainstrain AF19-4AC

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dorea formicigenerans strain AF19-4AC AF19-4AC.Scaf48, whole

Gene Summary

Adenine Count

1028895 bp

Thymine Count

1033731 bp

Guanine Count

692558 bp

Cytosine Count

701249 bp

Genome Length

3456853 bp

Protein-coding Genes

3115 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endopeptidase laDWX53_11205Not AvailableNegative2314742 - 231708788350.2
atp-dependent clp protease atp-binding subunit clpxDWX53_11210Not AvailableNegative2317151 - 231841046526.9
atp-dependent clp endopeptidase proteolytic subunit clppDWX53_11215Not AvailableNegative2318449 - 231903021228.4
trigger factorDWX53_11220Not AvailableNegative2319064 - 232035048087.2
dj-1 family proteinDWX53_11225Not AvailableNegative2320503 - 232106620426.5
cyth domain-containing proteinDWX53_11230Not AvailablePositive2321173 - 232162217501.7
helix-turn-helix domain-containing proteinDWX53_11235Not AvailablePositive2321764 - 232217115905.0
aspartate kinaseDWX53_11240Not AvailableNegative2322196 - 232340443902.9
homoserine dehydrogenaseDWX53_11245Not AvailableNegative2323420 - 232464044828.9
peptide chain release factor 2DWX53_11250Not AvailableNegative2324637 - 232576242621.4

Displaying genes 2151 – 2160 of 3214 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.