Dorea formicigenerans strain AF19-4AC

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea formicigenerans strain AF19-4AC is a Gram-positive, anaerobic bacterium primarily found in the gut of Homo sapiens. This strain possesses flagella, which may contribute to its motility within the intestinal environment. Notably, it has a single replicon, indicating a streamlined genomic structure that could play a role in its adaptability and survival in the complex gut microbiome. The anaerobic nature of Dorea formicigenerans suggests that it thrives in low-oxygen conditions typical of the human gastrointestinal tract. This trait is crucial, as the gut is a habitat with a diverse array of microbial communities that compete for resources and space. The presence of flagella in this strain could facilitate its movement and colonization within the gut, allowing it to establish itself effectively amidst other microorganisms. The accession number QRWH00000000.1 provides a reference for further studies and genomic analysis of this strain. Understanding Dorea formicigenerans and its interactions in the gut ecosystem can offer insights into its role in human health. Research into its metabolic functions and contributions to gut health could reveal its importance in digestion, nutrient absorption, and maintaining a balanced microbiome. This highlights the potential ecological significance of Dorea formicigenerans within the complex interactions that define gut microbiota.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea formicigenerans
Strainstrain AF19-4AC

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dorea formicigenerans strain AF19-4AC AF19-4AC.Scaf48, whole

Gene Summary

Adenine Count

1028895 bp

Thymine Count

1033731 bp

Guanine Count

692558 bp

Cytosine Count

701249 bp

Genome Length

3456853 bp

Protein-coding Genes

3115 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
caspase family proteinDWX53_10385Not AvailableNegative2137749 - 213921555430.2
tnpv proteinDWX53_10390Not AvailableNegative2139382 - 213975314409.3
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdDWX53_10395Not AvailableNegative2139785 - 214144061772.5
nyn domain-containing proteinDWX53_10400Not AvailableNegative2141469 - 214239535182.8
duf4366 domain-containing proteinDWX53_10405Not AvailableNegative2142467 - 21427099109.48
dna helicase pcraDWX53_10410Not AvailableNegative2142897 - 214515585904.2
duf3783 domain-containing proteinDWX53_10415Not AvailableNegative2145178 - 214559415937.5
dna-binding response regulatorDWX53_10420Not AvailableNegative2145710 - 214642027048.8
duf4118 domain-containing proteinDWX53_10425Not AvailableNegative2146410 - 214746539009.8
duf1836 domain-containing proteinDWX53_10430Not AvailablePositive2147696 - 214831023782.4

Displaying genes 1991 – 2000 of 3214 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.