Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor/glpr transcriptional regulator | DWX60_04935 | Not Available | Negative | 1238056 - 1238811 | 27350.1 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | DWX60_04940 | Not Available | Negative | 1238823 - 1239437 | 22216.8 |
| duf5060 domain-containing protein | DWX60_04945 | Not Available | Negative | 1239559 - 1241163 | 61924.9 |
| hybrid sensor histidine kinase/response regulator | DWX60_04950 | Not Available | Negative | 1241328 - 1245650 | 165162.0 |
| hypothetical protein | DWX60_04955 | Not Available | Negative | 1245864 - 1246544 | 24715.3 |
| nucleotidyltransferase | DWX60_04965 | Not Available | Negative | 1247762 - 1248673 | 33769.1 |
| hypothetical protein | DWX60_04970 | Not Available | Negative | 1248808 - 1251165 | 89027.6 |
| hypothetical protein | DWX60_04975 | Not Available | Negative | 1251162 - 1255811 | 171769.0 |
| peptidylprolyl isomerase | DWX60_04985 | Not Available | Positive | 1256522 - 1257367 | 31477.6 |
| insulinase family protein | DWX60_04990 | Not Available | Positive | 1257380 - 1258624 | 47363.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

