Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DWX60_04675 | Not Available | Positive | 1177233 - 1178729 | 56829.7 |
| mechanosensitive ion channel family protein | DWX60_04680 | Not Available | Negative | 1178848 - 1180041 | 45202.9 |
| multidrug efflux rnd transporter permease subunit | DWX60_04685 | Not Available | Negative | 1180158 - 1183274 | 112572.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWX60_04690 | Not Available | Negative | 1183279 - 1184412 | 41455.7 |
| tolc family protein | DWX60_04695 | Not Available | Negative | 1184467 - 1185864 | 51991.1 |
| hypothetical protein | DWX60_04700 | Not Available | Negative | 1185996 - 1186538 | 19666.0 |
| electron transfer flavoprotein beta subunit/fixa family protein | DWX60_04705 | Not Available | Positive | 1186744 - 1187637 | 31873.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | DWX60_04710 | Not Available | Positive | 1187643 - 1188662 | 36698.3 |
| four helix bundle protein | DWX60_04715 | Not Available | Positive | 1188698 - 1189078 | 14337.4 |
| acyl-coa dehydrogenase | DWX60_04720 | Not Available | Positive | 1189120 - 1190826 | 63864.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

