Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_04525 | Not Available | Negative | 1129001 - 1129183 | 6442.35 |
| hypothetical protein | DWX60_04530 | Not Available | Negative | 1129265 - 1129450 | 6428.26 |
| hypothetical protein | DWX60_04535 | Not Available | Positive | 1129874 - 1131748 | 73361.7 |
| duf3244 domain-containing protein | DWX60_04540 | Not Available | Positive | 1131911 - 1132303 | 14489.4 |
| hypothetical protein | DWX60_04545 | Not Available | Positive | 1132324 - 1132560 | 9326.37 |
| peptidase domain-containing abc transporter | DWX60_04550 | Not Available | Positive | 1132715 - 1134916 | 83592.8 |
| hlyd family secretion protein | DWX60_04555 | Not Available | Positive | 1134966 - 1136108 | 43823.5 |
| hypothetical protein | DWX60_04560 | Not Available | Positive | 1136142 - 1136342 | 7419.48 |
| radical sam protein | DWX60_04565 | Not Available | Positive | 1136320 - 1137831 | 58154.3 |
| peptidase c39 | DWX60_04570 | Not Available | Positive | 1137824 - 1138405 | 23420.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

