Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | DWX60_04315 | Not Available | Negative | 1079371 - 1080366 | 38504.3 |
| rna polymerase sigma-70 factor | DWX60_04320 | Not Available | Negative | 1080425 - 1081033 | 23944.0 |
| nadp-dependent malic enzyme | DWX60_04325 | Not Available | Positive | 1081685 - 1083970 | 84255.2 |
| hypothetical protein | DWX60_04330 | Not Available | Positive | 1084099 - 1084281 | 6713.74 |
| nadp-specific glutamate dehydrogenase | DWX60_04335 | Not Available | Positive | 1084437 - 1085771 | 48972.7 |
| hypothetical protein | DWX60_04340 | Not Available | Positive | 1085927 - 1087075 | 42381.6 |
| port family protein | DWX60_04345 | Not Available | Positive | 1087084 - 1087860 | 29116.1 |
| duf4925 domain-containing protein | DWX60_04350 | Not Available | Negative | 1088717 - 1089922 | 43424.5 |
| phosphoenolpyruvate synthase | DWX60_04355 | Not Available | Negative | 1090032 - 1092989 | 112937.0 |
| nadp-specific glutamate dehydrogenase | DWX60_04360 | Not Available | Positive | 1093224 - 1094561 | 48494.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

