Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_04215 | Not Available | Positive | 1047022 - 1047450 | 15791.5 |
| hypothetical protein | DWX60_04220 | Not Available | Positive | 1047538 - 1047834 | 11622.0 |
| acyltransferase | DWX60_04225 | Not Available | Positive | 1047868 - 1048605 | 27085.8 |
| mboat family protein | DWX60_04230 | Not Available | Negative | 1048662 - 1050143 | 57220.6 |
| hypothetical protein | DWX60_04235 | Not Available | Negative | 1050121 - 1051083 | 35940.5 |
| hypothetical protein | DWX60_04240 | Not Available | Negative | 1051070 - 1052437 | 50814.9 |
| hypothetical protein | DWX60_04245 | Not Available | Negative | 1052574 - 1052867 | 11224.5 |
| acrb/acrd/acrf family protein | DWX60_04250 | Not Available | Negative | 1052940 - 1056110 | 115826.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWX60_04255 | Not Available | Negative | 1056192 - 1057172 | 35916.7 |
| tolc family protein | DWX60_04260 | Not Available | Negative | 1057238 - 1058563 | 49635.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

