Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4249 domain-containing protein | DWX60_04160 | Not Available | Positive | 1036305 - 1037270 | 36343.1 |
| 4-phosphoerythronate dehydrogenase pdxb | DWX60_04165 | Not Available | Negative | 1037435 - 1038460 | 38339.9 |
| glycosyltransferase family 9 protein | DWX60_04170 | Not Available | Positive | 1038565 - 1039596 | 38600.2 |
| acetyltransferase | DWX60_04175 | Not Available | Positive | 1039597 - 1040520 | 37581.7 |
| udp-galactopyranose mutase | DWX60_04180 | Not Available | Positive | 1040523 - 1041629 | 42924.6 |
| glycosyltransferase family 2 protein | DWX60_04185 | Not Available | Positive | 1041713 - 1042429 | 27429.8 |
| hypothetical protein | DWX60_04190 | Not Available | Positive | 1042445 - 1043197 | 29433.6 |
| glycosyltransferase | DWX60_04195 | Not Available | Positive | 1043212 - 1044111 | 34450.6 |
| glycosyltransferase family 2 protein | DWX60_04200 | Not Available | Positive | 1044339 - 1045250 | 35725.8 |
| glycosyl transferase | DWX60_04205 | Not Available | Positive | 1045250 - 1046143 | 35490.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

