Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_04060 | Not Available | Negative | 1002311 - 1004233 | 73370.4 |
| hypothetical protein | DWX60_04065 | Not Available | Negative | 1004238 - 1005743 | 57457.0 |
| 6-phosphofructokinase | DWX60_04070 | Not Available | Positive | 1005890 - 1006900 | 35787.3 |
| response regulator | DWX60_04075 | Not Available | Negative | 1006910 - 1010983 | 154954.0 |
| tonb-dependent receptor | DWX60_04080 | Not Available | Positive | 1011168 - 1014335 | 117968.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWX60_04085 | Not Available | Positive | 1014348 - 1016396 | 77368.8 |
| duf229 domain-containing protein | DWX60_04090 | Not Available | Positive | 1016633 - 1018069 | 55085.7 |
| glycoside hydrolase family 29 | DWX60_04095 | Not Available | Positive | 1018073 - 1019458 | 52631.5 |
| glycoside hydrolase family 36 | DWX60_04100 | Not Available | Positive | 1019465 - 1021540 | 78481.9 |
| sulfatase | DWX60_04105 | Not Available | Positive | 1021559 - 1023112 | 57826.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

