Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine adenosyltransferase | DWX60_00350 | Not Available | Negative | 75086 - 76378 | 47598.8 |
| dha2 family efflux mfs transporter permease subunit | DWX60_00355 | Not Available | Positive | 76656 - 78032 | 49032.6 |
| metallophosphoesterase | DWX60_00360 | Not Available | Positive | 78086 - 78916 | 31399.9 |
| acyltransferase | DWX60_00365 | Not Available | Positive | 78931 - 80073 | 43783.9 |
| hypothetical protein | DWX60_00370 | Not Available | Positive | 80432 - 82309 | 72902.8 |
| duf3244 domain-containing protein | DWX60_00375 | Not Available | Positive | 82492 - 82860 | 13903.9 |
| hypothetical protein | DWX60_00380 | Not Available | Positive | 82872 - 83444 | 22529.2 |
| hemolysin | DWX60_00385 | Not Available | Positive | 83474 - 84334 | 32446.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DWX60_00395 | Not Available | Negative | 84746 - 85192 | 16503.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DWX60_00400 | Not Available | Negative | 85211 - 86266 | 40182.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

