Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4221 domain-containing protein | DWX60_04010 | Not Available | Positive | 986446 - 987630 | 46067.9 |
| duf2062 domain-containing protein | DWX60_04015 | Not Available | Positive | 987752 - 988945 | 44778.8 |
| methyltransferase domain-containing protein | DWX60_04020 | Not Available | Positive | 988938 - 992792 | 146648.0 |
| nad(p)/fad-dependent oxidoreductase | DWX60_04025 | Not Available | Positive | 992785 - 994275 | 56663.1 |
| choloylglycine hydrolase | DWX60_04030 | Not Available | Positive | 994268 - 995932 | 63093.3 |
| phenylacetate--coa ligase family protein | DWX60_04035 | Not Available | Positive | 995934 - 997229 | 49526.5 |
| hypothetical protein | DWX60_04040 | Not Available | Positive | 997280 - 997855 | 21488.1 |
| pas domain-containing protein | DWX60_04045 | Not Available | Negative | 997973 - 1000396 | 92915.8 |
| hypothetical protein | DWX60_04050 | Not Available | Positive | 1000595 - 1001416 | 30751.9 |
| duf3108 domain-containing protein | DWX60_04055 | Not Available | Negative | 1001505 - 1002314 | 31356.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

