Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-acp synthase | DWX60_03960 | Not Available | Positive | 977860 - 979590 | 63634.1 |
| acyl carrier protein | DWX60_03965 | Not Available | Positive | 979596 - 979853 | 9574.45 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DWX60_03970 | Not Available | Positive | 979850 - 981040 | 42024.2 |
| 3-oxoacyl-acp synthase | DWX60_03975 | Not Available | Positive | 981044 - 981997 | 35407.6 |
| kila-n domain-containing protein | DWX60_03980 | Not Available | Positive | 982111 - 982965 | 33282.9 |
| polysaccharide deacetylase family protein | DWX60_03985 | Not Available | Positive | 983016 - 983708 | 26571.1 |
| outer membrane lipoprotein carrier protein lola | DWX60_03990 | Not Available | Positive | 984446 - 985081 | 24782.2 |
| hypothetical protein | DWX60_03995 | Not Available | Positive | 985056 - 985598 | 20836.8 |
| hydroxymyristoyl-acp dehydratase | DWX60_04000 | Not Available | Positive | 985600 - 985980 | 14361.6 |
| hypothetical protein | DWX60_04005 | Not Available | Positive | 986089 - 986373 | 9654.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

