Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3575 domain-containing protein | DWX60_03760 | Not Available | Negative | 915196 - 915765 | 21771.4 |
| duf5033 domain-containing protein | DWX60_03765 | Not Available | Positive | 916205 - 916810 | 22809.1 |
| response regulator | DWX60_03770 | Not Available | Positive | 917163 - 921284 | 157384.0 |
| translational gtpase typa | DWX60_03775 | Not Available | Positive | 921351 - 923153 | 67346.3 |
| proton-conducting membrane transporter | DWX60_03780 | Not Available | Negative | 923214 - 923864 | 23949.2 |
| phosphoenolpyruvate carboxykinase (atp) | DWX60_03785 | Not Available | Negative | 923970 - 925577 | 59092.1 |
| uracil phosphoribosyltransferase | DWX60_03790 | Not Available | Positive | 925838 - 926497 | 24424.5 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | DWX60_03795 | Not Available | Negative | 926654 - 927658 | 36538.8 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | DWX60_03800 | Not Available | Negative | 927682 - 929529 | 66247.6 |
| Trna-arg | Not Available | Not Available | Positive | 929940 - 930014 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

