Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-ribosylhomocysteine lyase | DWX60_03710 | Not Available | Positive | 905080 - 905565 | 18473.2 |
| 30s ribosomal protein s15 | DWX60_03715 | Not Available | Negative | 905668 - 905937 | 10364.5 |
| hypothetical protein | DWX60_03720 | Not Available | Negative | 906218 - 906517 | 12076.5 |
| hypothetical protein | DWX60_03725 | Not Available | Negative | 906529 - 906774 | 9361.5 |
| duf4906 domain-containing protein | DWX60_03730 | Not Available | Negative | 906792 - 908906 | 78916.1 |
| hypothetical protein | DWX60_03735 | Not Available | Negative | 908943 - 910046 | 40347.9 |
| hypothetical protein | DWX60_03740 | Not Available | Negative | 910070 - 911116 | 39305.3 |
| hypothetical protein | DWX60_03745 | Not Available | Negative | 911201 - 912898 | 63058.4 |
| hypothetical protein | DWX60_03750 | Not Available | Negative | 913234 - 913536 | 11858.8 |
| duf3868 domain-containing protein | DWX60_03755 | Not Available | Negative | 913723 - 915183 | 54285.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

