Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_03460 | Not Available | Positive | 853396 - 854193 | 29865.8 |
| hypothetical protein | DWX60_03465 | Not Available | Positive | 854208 - 854864 | 24723.7 |
| conjugative transposon protein tram | DWX60_03470 | Not Available | Positive | 854880 - 855836 | 35304.6 |
| hypothetical protein | DWX60_03475 | Not Available | Positive | 856003 - 857373 | 52582.0 |
| hypothetical protein | DWX60_03480 | Not Available | Negative | 857356 - 857775 | 16252.7 |
| conjugative transposon protein tran | DWX60_03485 | Not Available | Positive | 858088 - 859212 | 43051.2 |
| m23 family peptidase | DWX60_03490 | Not Available | Positive | 859223 - 859774 | 20640.0 |
| hth domain-containing protein | DWX60_03495 | Not Available | Positive | 859771 - 860001 | 9115.21 |
| hypothetical protein | DWX60_03500 | Not Available | Positive | 860723 - 861049 | 12003.7 |
| hypothetical protein | DWX60_03505 | Not Available | Negative | 861353 - 861658 | 10721.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

