Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | DWX60_03410 | Not Available | Positive | 843139 - 844053 | 32606.6 |
| hypothetical protein | DWX60_03415 | Not Available | Positive | 844135 - 847149 | 104012.0 |
| hypothetical protein | DWX60_03420 | Not Available | Positive | 847161 - 847964 | 28728.8 |
| hypothetical protein | DWX60_03425 | Not Available | Positive | 847961 - 848269 | 10903.7 |
| hypothetical protein | DWX60_03430 | Not Available | Positive | 848275 - 848586 | 11862.8 |
| hypothetical protein | DWX60_03435 | Not Available | Positive | 848599 - 848814 | 8096.92 |
| hypothetical protein | DWX60_03440 | Not Available | Positive | 849033 - 849251 | 8477.16 |
| conjugal transfer protein | DWX60_03445 | Not Available | Positive | 849808 - 852252 | 94169.9 |
| hypothetical protein | DWX60_03450 | Not Available | Positive | 852249 - 852821 | 20942.7 |
| duf4141 domain-containing protein | DWX60_03455 | Not Available | Positive | 852846 - 853391 | 20091.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

