Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_03360 | Not Available | Positive | 835734 - 835952 | 8307.1 |
| hypothetical protein | DWX60_03365 | Not Available | Positive | 835972 - 836208 | 9017.67 |
| Trna-thr | Not Available | Not Available | Positive | 836210 - 836284 | Not Available |
| duf4373 domain-containing protein | DWX60_03375 | Not Available | Positive | 836316 - 837407 | 41476.5 |
| hypothetical protein | DWX60_03380 | Not Available | Positive | 837501 - 838409 | 33889.4 |
| duf2786 domain-containing protein | DWX60_03385 | Not Available | Positive | 838423 - 839142 | 27560.4 |
| duf3127 domain-containing protein | DWX60_03390 | Not Available | Positive | 839305 - 839610 | 11762.0 |
| duf3575 domain-containing protein | DWX60_03395 | Not Available | Positive | 839607 - 840146 | 20701.2 |
| hypothetical protein | DWX60_03400 | Not Available | Positive | 840147 - 842231 | 80774.2 |
| hypothetical protein | DWX60_03405 | Not Available | Positive | 842224 - 843102 | 31891.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

