Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | DWX60_03310 | Not Available | Negative | 828752 - 829288 | 20476.6 |
| hypothetical protein | DWX60_03315 | Not Available | Negative | 829285 - 829755 | 17754.4 |
| recombination protein recr | DWX60_03320 | Not Available | Negative | 829776 - 830393 | 22458.3 |
| sodium:solute symporter | DWX60_03325 | Not Available | Positive | 830472 - 831953 | 55365.8 |
| gtp-binding protein | DWX60_03330 | Not Available | Positive | 831919 - 832521 | 23034.9 |
| hypothetical protein | DWX60_03335 | Not Available | Negative | 832626 - 833738 | 42483.4 |
| hypothetical protein | DWX60_03340 | Not Available | Positive | 834012 - 834386 | 14698.8 |
| duf4373 domain-containing protein | DWX60_03345 | Not Available | Positive | 834471 - 834842 | 14419.2 |
| hypothetical protein | DWX60_03350 | Not Available | Positive | 834862 - 835080 | 8204.02 |
| hypothetical protein | DWX60_03355 | Not Available | Positive | 835103 - 835537 | 17197.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

