Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | DWX60_03255 | Not Available | Positive | 818632 - 820179 | 56920.5 |
| crp/fnr family transcriptional regulator | DWX60_03260 | Not Available | Negative | 820463 - 821053 | 21991.1 |
| hydroxylamine reductase | DWX60_03265 | Not Available | Positive | 821168 - 822826 | 61231.5 |
| iron-sulfur cluster repair di-iron protein | DWX60_03270 | Not Available | Positive | 822838 - 823569 | 27881.1 |
| glycoside hydrolase family 95 protein | DWX60_03275 | Not Available | Negative | 823649 - 826108 | 91846.4 |
| mobilization protein | DWX60_03280 | Not Available | Positive | 826128 - 826586 | 18105.8 |
| hypothetical protein | DWX60_03285 | Not Available | Positive | 826733 - 827200 | 18222.9 |
| Trna-asp | Not Available | Not Available | Positive | 827865 - 827938 | Not Available |
| hypothetical protein | DWX60_03300 | Not Available | Negative | 827916 - 828113 | 7902.13 |
| yqge/algh family protein | DWX60_03305 | Not Available | Positive | 828169 - 828759 | 22412.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

