Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_03205 | Not Available | Negative | 808421 - 808834 | 16367.0 |
| hypothetical protein | DWX60_03210 | Not Available | Negative | 808844 - 809098 | 9226.99 |
| atp synthase subunit beta | DWX60_03215 | Not Available | Negative | 809107 - 810642 | 56123.4 |
| peptidase m28 | DWX60_03220 | Not Available | Negative | 810838 - 812385 | 57370.0 |
| glycosyltransferase | DWX60_03225 | Not Available | Negative | 812588 - 813715 | 43510.5 |
| udp-2,3-diacylglucosamine diphosphatase | DWX60_03230 | Not Available | Negative | 813712 - 814515 | 31123.0 |
| hypothetical protein | DWX60_03235 | Not Available | Negative | 814692 - 815129 | 16856.3 |
| sensor histidine kinase | DWX60_03240 | Not Available | Negative | 815231 - 816517 | 49696.0 |
| dna-binding response regulator | DWX60_03245 | Not Available | Negative | 816518 - 817195 | 25957.3 |
| hypothetical protein | DWX60_03250 | Not Available | Negative | 817416 - 818153 | 27787.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

