Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-containing alcohol dehydrogenase | DWX60_03105 | Not Available | Positive | 783941 - 785116 | 43284.4 |
| hypothetical protein | DWX60_03110 | Not Available | Positive | 785429 - 786652 | 48463.2 |
| hypothetical protein | DWX60_03115 | Not Available | Positive | 786658 - 787239 | 23365.4 |
| atp-binding protein | DWX60_03120 | Not Available | Positive | 787223 - 790876 | 144612.0 |
| helicase | DWX60_03125 | Not Available | Positive | 791194 - 793251 | 79335.9 |
| hypothetical protein | DWX60_03130 | Not Available | Negative | 793441 - 793536 | 3390.07 |
| hypothetical protein | DWX60_03135 | Not Available | Negative | 793631 - 794509 | 33609.2 |
| hypothetical protein | DWX60_03140 | Not Available | Positive | 794756 - 796114 | 51090.7 |
| phosphonoacetaldehyde hydrolase | DWX60_03145 | Not Available | Positive | 796157 - 796945 | 29146.5 |
| 2-aminoethylphosphonate--pyruvate transaminase | DWX60_03150 | Not Available | Positive | 796952 - 798040 | 40707.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

