Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_03055 | Not Available | Positive | 770471 - 771019 | 20490.6 |
| copper-translocating p-type atpase | DWX60_03060 | Not Available | Negative | 771107 - 773320 | 79986.0 |
| duf3298 domain-containing protein | DWX60_03065 | Not Available | Positive | 773499 - 774347 | 32058.1 |
| ribosomal rna small subunit methyltransferase g | DWX60_03070 | Not Available | Positive | 774368 - 774997 | 23835.2 |
| mbl fold metallo-hydrolase | DWX60_03075 | Not Available | Positive | 775015 - 775653 | 23832.3 |
| glycine dehydrogenase (aminomethyl-transferring) | DWX60_03080 | Not Available | Positive | 775689 - 778538 | 105226.0 |
| s9 family peptidase | DWX60_03085 | Not Available | Negative | 778819 - 781533 | 102677.0 |
| hypothetical protein | DWX60_03090 | Not Available | Negative | 781566 - 781802 | 8867.62 |
| hypothetical protein | DWX60_03095 | Not Available | Positive | 781926 - 782153 | 8214.64 |
| formate--tetrahydrofolate ligase | DWX60_03100 | Not Available | Negative | 782185 - 783852 | 60554.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

