Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | DWX60_00250 | Not Available | Negative | 53936 - 54634 | 25718.4 |
| hypothetical protein | DWX60_00255 | Not Available | Negative | 54943 - 55191 | 9386.45 |
| tetratricopeptide repeat protein | DWX60_00260 | Not Available | Negative | 55369 - 57027 | 64560.9 |
| hypothetical protein | DWX60_00265 | Not Available | Negative | 57136 - 58803 | 64171.6 |
| port family protein | DWX60_00270 | Not Available | Negative | 58846 - 59433 | 21981.3 |
| hypothetical protein | DWX60_00275 | Not Available | Positive | 59486 - 59677 | 6917.68 |
| glycoside hydrolase | DWX60_00280 | Not Available | Negative | 59640 - 61619 | 75345.0 |
| dna mismatch repair protein muts | DWX60_00285 | Not Available | Negative | 61669 - 64281 | 97841.4 |
| flavin reductase family protein | DWX60_00290 | Not Available | Positive | 64400 - 64906 | 19394.2 |
| transposase family protein | DWX60_00295 | Not Available | Positive | 65024 - 65374 | 13836.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

