Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_03005 | Not Available | Positive | 762575 - 762781 | 8026.87 |
| hypothetical protein | DWX60_03010 | Not Available | Positive | 762784 - 763056 | 9634.16 |
| hypothetical protein | DWX60_03015 | Not Available | Positive | 763077 - 763838 | 29375.2 |
| hypothetical protein | DWX60_03020 | Not Available | Positive | 764055 - 764432 | 14256.6 |
| hypothetical protein | DWX60_03025 | Not Available | Negative | 765112 - 765321 | 7947.52 |
| hypothetical protein | DWX60_03030 | Not Available | Negative | 765490 - 765804 | 11444.2 |
| hypothetical protein | DWX60_03035 | Not Available | Positive | 766051 - 766533 | 18387.0 |
| long-chain fatty acid--coa ligase | DWX60_03040 | Not Available | Positive | 766745 - 768409 | 62496.0 |
| lipoyl(octanoyl) transferase lipb | DWX60_03045 | Not Available | Negative | 768619 - 769707 | 40815.6 |
| phosphohydrolase | DWX60_03050 | Not Available | Positive | 769773 - 770474 | 27543.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

