Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exonuclease | DWX60_02955 | Not Available | Negative | 752408 - 752896 | 18589.9 |
| patatin | DWX60_02960 | Not Available | Positive | 753104 - 755314 | 81937.5 |
| mannonate dehydratase | DWX60_02965 | Not Available | Negative | 755297 - 756475 | 44709.8 |
| type i pullulanase | DWX60_02970 | Not Available | Negative | 756533 - 758527 | 74624.4 |
| crossover junction endodeoxyribonuclease ruvc | DWX60_02975 | Not Available | Negative | 758532 - 759101 | 21117.3 |
| duf4286 family protein | DWX60_02980 | Not Available | Negative | 759098 - 759403 | 11925.3 |
| Trna-ala | Not Available | Not Available | Positive | 759466 - 759539 | Not Available |
| duf2158 domain-containing protein | DWX60_02990 | Not Available | Positive | 759826 - 760056 | 8654.51 |
| is1595-like element isbun2 family transposase | DWX60_02995 | Not Available | Positive | 760430 - 761395 | 37170.2 |
| hypothetical protein | DWX60_03000 | Not Available | Positive | 761755 - 762567 | 30634.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

