Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_02805 | Not Available | Negative | 717092 - 717676 | 21939.4 |
| hypothetical protein | DWX60_02810 | Not Available | Negative | 717729 - 717977 | 9624.58 |
| hypothetical protein | DWX60_02815 | Not Available | Negative | 717994 - 720318 | 88968.2 |
| rna methyltransferase | DWX60_02820 | Not Available | Positive | 720420 - 721175 | 28016.0 |
| hypothetical protein | DWX60_02825 | Not Available | Negative | 721247 - 721570 | 12222.7 |
| duf4296 domain-containing protein | DWX60_02830 | Not Available | Negative | 721586 - 722560 | 37267.1 |
| lipoprotein signal peptidase | DWX60_02835 | Not Available | Negative | 722564 - 723202 | 24077.7 |
| trar/dksa family transcriptional regulator | DWX60_02840 | Not Available | Negative | 723312 - 723692 | 14347.1 |
| isoleucine--trna ligase | DWX60_02845 | Not Available | Negative | 723716 - 727204 | 132205.0 |
| arac family transcriptional regulator | DWX60_02850 | Not Available | Negative | 727413 - 728246 | 32094.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

