Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWX60_02755 | Not Available | Negative | 708852 - 709265 | 15741.7 |
| tagaturonate reductase | DWX60_02760 | Not Available | Negative | 709367 - 710806 | 53907.1 |
| uronate isomerase | DWX60_02765 | Not Available | Positive | 711132 - 712538 | 54309.7 |
| tlpa family protein disulfide reductase | DWX60_02770 | Not Available | Negative | 712627 - 713826 | 46074.1 |
| winged helix family transcriptional regulator | DWX60_02775 | Not Available | Positive | 714008 - 714970 | 37688.8 |
| mbl fold metallo-hydrolase | DWX60_02780 | Not Available | Positive | 715124 - 715927 | 29886.9 |
| Trna-lys | Not Available | Not Available | Positive | 716016 - 716091 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 716113 - 716188 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 716206 - 716281 | Not Available |
| hypothetical protein | DWX60_02800 | Not Available | Negative | 716412 - 716630 | 8572.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

