Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF20-10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430907 bp
Thymine Count
1387512 bp
Guanine Count
978085 bp
Cytosine Count
1055327 bp
Genome Length
4853285 bp
Protein-coding Genes
3848 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin | DWX60_02705 | Not Available | Positive | 696784 - 697320 | 19869.9 |
| flavin reductase family protein | DWX60_02710 | Not Available | Positive | 697326 - 697886 | 20230.2 |
| precorrin-3b c(17)-methyltransferase | DWX60_02715 | Not Available | Positive | 698566 - 699972 | 51753.8 |
| bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferase | DWX60_02720 | Not Available | Positive | 699977 - 701158 | 44294.9 |
| precorrin-4 c(11)-methyltransferase | DWX60_02725 | Not Available | Positive | 701180 - 702991 | 67020.4 |
| cobalt-precorrin-5b (c(1))-methyltransferase | DWX60_02730 | Not Available | Positive | 703017 - 704813 | 66015.2 |
| abc transporter atp-binding protein | DWX60_02735 | Not Available | Negative | 704835 - 705854 | 37541.6 |
| iron abc transporter permease | DWX60_02740 | Not Available | Negative | 705857 - 706894 | 36729.8 |
| iron abc transporter substrate-binding protein | DWX60_02745 | Not Available | Negative | 706906 - 708057 | 43275.9 |
| precorrin-2 c(20)-methyltransferase | DWX60_02750 | Not Available | Positive | 708161 - 708889 | 27466.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

